A consensus framework for exploring microarray data using multiple clustering methods

Ted Laderas and Shannon McWeeney

Supplemental Website

• Paper (PDF)
• Poster given at Bioconductor 2005 (PPT)
• Consense in 10 minutes - presentation given at OHSU Student Research Forum 2005 (PPT)
• Ted's Master's Thesis (PDF), which this paper is based on
• Consense Software for R/Bioconductor
  • Download Software
  • Quick Start Tutorial
• R/Bioconductor Package Dependencies
• Known Issues/Bugs
• Web-only appendix: Formulas for Metrics used in Consense
• Simulated Datasets
• Details about the generation of profiles
• Assessing Classification Accuracy
• Datasets Generated
• Cho Data Set
  • Link to dataset for download
  • Complete list of Index Genes
  • Pathway Diagram for 100% Frequency Genes

Please address any software concerns to laderast@ohsu.edu.